Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.89□□□□□ -0.67
APOC4P55056 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 AC012441.2-201ENST00000444843 739 ntBASIC10.89□□□□□ -0.67
APOC4P55056 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
APOC4P55056 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.89□□□□□ -0.67
APOC4P55056 DUX4L46-201ENST00000566845 751 ntBASIC10.89□□□□□ -0.67
APOC4P55056 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 MIR3615-201ENST00000581999 87 ntBASIC10.89□□□□□ -0.67
APOC4P55056 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.89□□□□□ -0.67
APOC4P55056 AC009884.2-201ENST00000603110 324 ntBASIC10.89□□□□□ -0.67
APOC4P55056 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.89□□□□□ -0.67
APOC4P55056 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 FP325330.2-201ENST00000624219 5630 ntBASIC10.89□□□□□ -0.67
APOC4P55056 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.89□□□□□ -0.67
APOC4P55056 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC10.88□□□□□ -0.67
APOC4P55056 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
APOC4P55056 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
APOC4P55056 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.88□□□□□ -0.67
APOC4P55056 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
APOC4P55056 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 RN7SKP230-201ENST00000365642 335 ntBASIC10.88□□□□□ -0.67
APOC4P55056 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.88□□□□□ -0.67
APOC4P55056 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.88□□□□□ -0.67
APOC4P55056 AC010141.1-201ENST00000411585 623 ntBASIC10.88□□□□□ -0.67
APOC4P55056 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 AC011742.3-201ENST00000439053 820 ntBASIC10.88□□□□□ -0.67
APOC4P55056 EIF4HP1-201ENST00000453115 687 ntBASIC10.88□□□□□ -0.67
APOC4P55056 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 SERPINA13P-202ENST00000478994 924 ntBASIC10.88□□□□□ -0.67
APOC4P55056 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.88□□□□□ -0.67
APOC4P55056 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.88□□□□□ -0.67
APOC4P55056 RN7SL163P-201ENST00000583100 276 ntBASIC10.88□□□□□ -0.67
APOC4P55056 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.88□□□□□ -0.67
APOC4P55056 AC020910.5-201ENST00000623668 1865 ntBASIC10.88□□□□□ -0.67
APOC4P55056 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.88□□□□□ -0.67
APOC4P55056 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms