Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A2P52657 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A2P52657 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A2P52657 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.89■□□□□ 0.29
GTF2A2P52657 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.88■□□□□ 0.29
GTF2A2P52657 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.88■□□□□ 0.29
GTF2A2P52657 ST13P19-201ENST00000442505 1124 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.88■□□□□ 0.29
GTF2A2P52657 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 RN7SL277P-201ENST00000481521 288 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 AC007952.4-201ENST00000573866 637 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
GTF2A2P52657 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 AC007250.1-201ENST00000608934 338 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 AC002472.4-201ENST00000641915 272 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 MROH4P-201ENST00000431302 1578 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 TEKT4P2-202ENST00000559466 1312 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 AC087481.3-201ENST00000602886 1894 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
GTF2A2P52657 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A2P52657 WASH3P-207ENST00000560956 1394 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 AL136172.1-201ENST00000598590 1394 ntBASIC16.88■□□□□ 0.29
GTF2A2P52657 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A2P52657 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.87■□□□□ 0.29
GTF2A2P52657 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
GTF2A2P52657 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.87■□□□□ 0.29
GTF2A2P52657 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.87■□□□□ 0.29
GTF2A2P52657 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.87■□□□□ 0.29
GTF2A2P52657 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 AP001527.2-201ENST00000614441 631 ntBASIC16.87■□□□□ 0.29
GTF2A2P52657 AC011471.3-201ENST00000623576 402 ntBASIC16.87■□□□□ 0.29
GTF2A2P52657 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.87■□□□□ 0.29
GTF2A2P52657 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 AC026691.1-201ENST00000602502 2017 ntBASIC16.87■□□□□ 0.29
GTF2A2P52657 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
GTF2A2P52657 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GTF2A2P52657 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GTF2A2P52657 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A2P52657 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A2P52657 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.86■□□□□ 0.29
GTF2A2P52657 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.86■□□□□ 0.29
GTF2A2P52657 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GTF2A2P52657 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GTF2A2P52657 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.86■□□□□ 0.29
GTF2A2P52657 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms