Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN4P51793 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 PHBP15-201ENST00000574228 665 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 LINC01783-202ENST00000614408 828 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 BX284668.2-205ENST00000619677 828 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 LINC01165-201ENST00000445190 1623 ntBASIC15.53■□□□□ 0.08
CLCN4P51793 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN4P51793 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN4P51793 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN4P51793 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN4P51793 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN4P51793 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 AC015909.3-201ENST00000572855 1794 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN4P51793 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CLCN4P51793 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLCN4P51793 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCN4P51793 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCN4P51793 XBP1P1-201ENST00000436573 652 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCN4P51793 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN4P51793 PGAM1P5-201ENST00000548011 764 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN4P51793 AC135983.4-201ENST00000564116 1262 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCN4P51793 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
CLCN4P51793 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCN4P51793 MIR6842-201ENST00000612539 65 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 AC242376.2-201ENST00000619355 883 ntBASIC15.52■□□□□ 0.08
CLCN4P51793 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN4P51793 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CLCN4P51793 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCN4P51793 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLCN4P51793 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLCN4P51793 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN4P51793 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCN4P51793 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCN4P51793 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 AP000356.3-201ENST00000382243 753 ntBASIC15.51■□□□□ 0.07
CLCN4P51793 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCN4P51793 RPS9P1-201ENST00000419943 583 ntBASIC15.51■□□□□ 0.07
CLCN4P51793 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN4P51793 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCN4P51793 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.51■□□□□ 0.07
CLCN4P51793 MIR3188-201ENST00000583494 85 ntBASIC15.51■□□□□ 0.07
CLCN4P51793 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.51■□□□□ 0.07
CLCN4P51793 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 AC092299.1-201ENST00000632679 757 ntBASIC15.51■□□□□ 0.07
CLCN4P51793 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CLCN4P51793 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 TMBIM7P-202ENST00000641474 1516 ntBASIC15.51■□□□□ 0.07
CLCN4P51793 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCN4P51793 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCN4P51793 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms