Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
UBE2AP49459 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC9.52□□□□□ -0.88
UBE2AP49459 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBE2AP49459 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.52□□□□□ -0.88
UBE2AP49459 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.52□□□□□ -0.88
UBE2AP49459 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
UBE2AP49459 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBE2AP49459 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
UBE2AP49459 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 USO1-201ENST00000264904 4135 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC9.52□□□□□ -0.89
UBE2AP49459 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 HNRNPA1P40-201ENST00000426371 1278 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 MEIS3P1-201ENST00000495167 958 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 AC093214.1-201ENST00000511688 1107 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC9.52□□□□□ -0.89
UBE2AP49459 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 DUX4L27-201ENST00000554796 1261 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC9.52□□□□□ -0.89
UBE2AP49459 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC093512.1-201ENST00000617969 520 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC005089.1-201ENST00000619486 2241 ntBASIC9.52□□□□□ -0.89
UBE2AP49459 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
UBE2AP49459 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBE2AP49459 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 AC139749.1-202ENST00000617529 3139 ntBASIC9.51□□□□□ -0.89
UBE2AP49459 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC9.51□□□□□ -0.89
UBE2AP49459 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.51□□□□□ -0.89
UBE2AP49459 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
UBE2AP49459 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
UBE2AP49459 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
UBE2AP49459 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.51□□□□□ -0.89
UBE2AP49459 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE2AP49459 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
UBE2AP49459 AC026748.1-201ENST00000624349 3251 ntBASIC9.51□□□□□ -0.89
UBE2AP49459 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms