Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 PRSS3P1-201ENST00000503996 742 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 AC087203.1-201ENST00000532111 1181 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.49■□□□□ 0.23
TM4SF4P48230 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.49■□□□□ 0.23
TM4SF4P48230 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC16.49■□□□□ 0.23
TM4SF4P48230 AC005777.1-201ENST00000588332 187 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 NKILA-202ENST00000614771 2598 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TM4SF4P48230 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.49■□□□□ 0.23
TM4SF4P48230 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TM4SF4P48230 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 AC005332.8-201ENST00000622750 2735 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.48■□□□□ 0.23
TM4SF4P48230 AC138761.6-201ENST00000583997 1423 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TM4SF4P48230 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TM4SF4P48230 OR10N1P-201ENST00000392758 869 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 NRADDP-201ENST00000437305 691 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 AC027612.2-202ENST00000445955 1199 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 HIST1H2APS2-201ENST00000454426 370 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 EEF1GP8-201ENST00000506566 1154 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.48■□□□□ 0.23
TM4SF4P48230 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 AL132994.1-201ENST00000554098 400 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 AC005274.1-201ENST00000623460 802 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 LINC00528-201ENST00000600723 2160 ntBASIC16.48■□□□□ 0.23
TM4SF4P48230 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.48■□□□□ 0.23
TM4SF4P48230 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TM4SF4P48230 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TM4SF4P48230 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 KRT18P62-201ENST00000446618 1287 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 AC092896.1-201ENST00000465850 380 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 AC005740.1-201ENST00000515639 522 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 URB1-AS1-201ENST00000534991 831 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 MIR4265-201ENST00000582152 99 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.47■□□□□ 0.23
TM4SF4P48230 TYMSP2-201ENST00000589501 424 ntBASIC16.47■□□□□ 0.23
TM4SF4P48230 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms