Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC005586.2-201ENST00000563946 837 ntBASIC19.62■□□□□ 0.73
USP6P35125 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.62■□□□□ 0.73
USP6P35125 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.62■□□□□ 0.73
USP6P35125 AC138466.5-201ENST00000624002 808 ntBASIC19.62■□□□□ 0.73
USP6P35125 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
USP6P35125 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP6P35125 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.62■□□□□ 0.73
USP6P35125 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP6P35125 AC006372.4-201ENST00000624122 1543 ntBASIC19.61■□□□□ 0.73
USP6P35125 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.61■□□□□ 0.73
USP6P35125 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.61■□□□□ 0.73
USP6P35125 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.61■□□□□ 0.73
USP6P35125 AC095040.1-201ENST00000513286 675 ntBASIC19.61■□□□□ 0.73
USP6P35125 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
USP6P35125 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.61■□□□□ 0.73
USP6P35125 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.61■□□□□ 0.73
USP6P35125 AL133467.4-201ENST00000602953 725 ntBASIC19.61■□□□□ 0.73
USP6P35125 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP6P35125 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USP6P35125 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.61■□□□□ 0.73
USP6P35125 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.61■□□□□ 0.73
USP6P35125 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP6P35125 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.6■□□□□ 0.73
USP6P35125 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 PPP1R2P4-201ENST00000424051 595 ntBASIC19.6■□□□□ 0.73
USP6P35125 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.6■□□□□ 0.73
USP6P35125 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 AC068867.1-201ENST00000559855 150 ntBASIC19.6■□□□□ 0.73
USP6P35125 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC19.6■□□□□ 0.73
USP6P35125 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
USP6P35125 AP000322.3-201ENST00000608665 388 ntBASIC19.6■□□□□ 0.73
USP6P35125 AC104506.1-201ENST00000609247 429 ntBASIC19.6■□□□□ 0.73
USP6P35125 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.6■□□□□ 0.73
USP6P35125 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.6■□□□□ 0.73
USP6P35125 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 MYADML-201ENST00000474610 2147 ntBASIC19.6■□□□□ 0.73
USP6P35125 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 AC018529.2-202ENST00000611482 3087 ntBASIC19.6■□□□□ 0.73
USP6P35125 AC067931.2-201ENST00000623655 2003 ntBASIC19.6■□□□□ 0.73
USP6P35125 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.6■□□□□ 0.73
USP6P35125 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP6P35125 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.6■□□□□ 0.73
USP6P35125 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP6P35125 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP6P35125 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.59■□□□□ 0.73
USP6P35125 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.59■□□□□ 0.73
USP6P35125 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.59■□□□□ 0.73
USP6P35125 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP6P35125 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.59■□□□□ 0.73
USP6P35125 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP6P35125 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP6P35125 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.59■□□□□ 0.73
USP6P35125 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP6P35125 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP6P35125 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms