Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 AL133267.1-201ENST00000398220 340 ntBASIC10.99□□□□□ -0.65
CKS2P33552 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 AC098831.1-202ENST00000438821 336 ntBASIC10.99□□□□□ -0.65
CKS2P33552 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS2P33552 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 FAM215A-202ENST00000632077 792 ntBASIC10.99□□□□□ -0.65
CKS2P33552 AC012617.1-204ENST00000586340 2305 ntBASIC10.99□□□□□ -0.65
CKS2P33552 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 AC011481.3-201ENST00000623895 5594 ntBASIC10.99□□□□□ -0.65
CKS2P33552 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CKS2P33552 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS2P33552 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
CKS2P33552 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CKS2P33552 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 AC023794.5-201ENST00000564380 2157 ntBASIC10.99□□□□□ -0.65
CKS2P33552 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS2P33552 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CKS2P33552 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS2P33552 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CKS2P33552 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CKS2P33552 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
CKS2P33552 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CKS2P33552 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS2P33552 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS2P33552 TARDBPP1-201ENST00000442013 1203 ntBASIC10.98□□□□□ -0.65
CKS2P33552 HCG4P8-203ENST00000443049 980 ntBASIC10.98□□□□□ -0.65
CKS2P33552 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms