Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC233724.13-201ENST00000598383 410 ntBASIC13.7□□□□□ -0.22
SHC1P29353 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
SHC1P29353 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.7□□□□□ -0.22
SHC1P29353 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SHC1P29353 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHC1P29353 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHC1P29353 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SHC1P29353 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 AC113367.3-201ENST00000508316 1912 ntBASIC13.69□□□□□ -0.22
SHC1P29353 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 AC092933.1-201ENST00000393644 945 ntBASIC13.69□□□□□ -0.22
SHC1P29353 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 KRT18P25-201ENST00000508931 1278 ntBASIC13.69□□□□□ -0.22
SHC1P29353 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.69□□□□□ -0.22
SHC1P29353 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 AC145423.3-201ENST00000615987 467 ntBASIC13.69□□□□□ -0.22
SHC1P29353 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.69□□□□□ -0.22
SHC1P29353 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SHC1P29353 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 AC018529.2-202ENST00000611482 3087 ntBASIC13.69□□□□□ -0.22
SHC1P29353 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.69□□□□□ -0.22
SHC1P29353 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHC1P29353 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.68□□□□□ -0.22
SHC1P29353 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SHC1P29353 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms