Protein–RNA interactions for Protein: P20671

HIST1H2AD, Histone H2A type 1-D, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ADP20671 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RN7SL48P-201ENST00000579283 293 ntBASIC14.63□□□□□ -0.07
HIST1H2ADP20671 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 ENPP7P14-201ENST00000621765 1040 ntBASIC14.63□□□□□ -0.07
HIST1H2ADP20671 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST1H2ADP20671 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TPM3P8-201ENST00000330554 643 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 C2orf27AP3-201ENST00000434123 579 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 AL354718.3-201ENST00000616414 581 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 AC132938.4-201ENST00000623835 848 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 CR382287.1-201ENST00000623954 586 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 CU639417.3-201ENST00000624240 1404 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 AC005912.2-201ENST00000619492 2400 ntBASIC14.62□□□□□ -0.07
HIST1H2ADP20671 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H2ADP20671 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H2ADP20671 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H2ADP20671 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H2ADP20671 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms