Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 AC073621.1-201ENST00000392730 636 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 MRPL20P1-201ENST00000400819 433 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 KRT18P27-201ENST00000427733 1299 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.48□□□□□ -0.57
RAB4AP20338 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 IGHV3-65-201ENST00000523210 341 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.48□□□□□ -0.57
RAB4AP20338 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 AC243562.2-201ENST00000561247 970 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 RN7SL850P-201ENST00000579959 291 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
RAB4AP20338 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 AC107918.4-202ENST00000641623 219 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 AL645728.2-201ENST00000641974 660 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 IER3-202ENST00000376377 1350 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 AC015802.1-201ENST00000588104 1449 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 AC073439.1-201ENST00000624121 1774 ntBASIC11.48□□□□□ -0.57
RAB4AP20338 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC11.48□□□□□ -0.57
RAB4AP20338 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RAB4AP20338 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.47□□□□□ -0.57
RAB4AP20338 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RAB4AP20338 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.47□□□□□ -0.57
RAB4AP20338 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RAB4AP20338 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.47□□□□□ -0.57
RAB4AP20338 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.47□□□□□ -0.57
RAB4AP20338 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms