Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 AC015909.5-201ENST00000624336 2266 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 YBX2P1-201ENST00000394192 760 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 MED15P5-201ENST00000423150 992 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 AC026150.2-201ENST00000564693 1156 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.09□□□□□ -0.31
RAB3BP20337 AC140113.2-201ENST00000604370 208 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 LINC01115-203ENST00000606068 577 ntBASIC13.09□□□□□ -0.31
RAB3BP20337 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB3BP20337 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
RAB3BP20337 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB3BP20337 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RAB3BP20337 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 KRT18P32-201ENST00000424695 1287 ntBASIC13.08□□□□□ -0.32
RAB3BP20337 AC005237.2-201ENST00000434368 219 ntBASIC13.08□□□□□ -0.32
RAB3BP20337 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB3BP20337 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 AC027601.4-201ENST00000611259 610 ntBASIC13.08□□□□□ -0.32
RAB3BP20337 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB3BP20337 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 AL033527.5-202ENST00000641632 1098 ntBASIC13.08□□□□□ -0.32
RAB3BP20337 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB3BP20337 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RAB3BP20337 AC011840.2-201ENST00000563063 1520 ntBASIC13.08□□□□□ -0.32
RAB3BP20337 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB3BP20337 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB3BP20337 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms