Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.52□□□□□ -0.4
CD74P04233 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
CD74P04233 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 BEND3P3-201ENST00000611030 2440 ntBASIC12.52□□□□□ -0.4
CD74P04233 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.52□□□□□ -0.4
CD74P04233 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.52□□□□□ -0.4
CD74P04233 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CD74P04233 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.52□□□□□ -0.4
CD74P04233 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD74P04233 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 CES1P1-201ENST00000421606 1704 ntBASIC12.52□□□□□ -0.41
CD74P04233 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD74P04233 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 AC004832.2-201ENST00000426397 482 ntBASIC12.52□□□□□ -0.41
CD74P04233 GPS2P2-201ENST00000430745 888 ntBASIC12.52□□□□□ -0.41
CD74P04233 MKNK2P1-201ENST00000437526 628 ntBASIC12.52□□□□□ -0.41
CD74P04233 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 AC009078.2-202ENST00000463353 338 ntBASIC12.52□□□□□ -0.41
CD74P04233 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.52□□□□□ -0.41
CD74P04233 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CD74P04233 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
CD74P04233 AC022145.2-201ENST00000598203 171 ntBASIC12.52□□□□□ -0.41
CD74P04233 C20orf181-201ENST00000623918 480 ntBASIC12.52□□□□□ -0.41
CD74P04233 AC004461.2-201ENST00000629517 803 ntBASIC12.52□□□□□ -0.41
CD74P04233 AC105339.1-204ENST00000636249 355 ntBASIC12.52□□□□□ -0.41
CD74P04233 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.52□□□□□ -0.41
CD74P04233 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 NCLP1-201ENST00000445357 1963 ntBASIC12.52□□□□□ -0.41
CD74P04233 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.52□□□□□ -0.41
CD74P04233 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CD74P04233 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD74P04233 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD74P04233 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CD74P04233 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD74P04233 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms