Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 ELK2AP-201ENST00000392510 1007 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 ISCA2P1-201ENST00000425548 448 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.28■□□□□ 0.52
CACNA1FO60840 AP000358.1-201ENST00000456260 156 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 UPF3AP2-201ENST00000457924 1132 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
CACNA1FO60840 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.28■□□□□ 0.52
CACNA1FO60840 YRDCP1-201ENST00000621419 643 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1FO60840 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1FO60840 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1FO60840 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 AC103592.1-201ENST00000394513 664 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 AC012618.1-201ENST00000461223 412 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 RN7SL277P-201ENST00000481521 288 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 MIR4754-201ENST00000582477 89 ntBASIC18.28■□□□□ 0.52
CACNA1FO60840 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1FO60840 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1FO60840 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1FO60840 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1FO60840 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.27■□□□□ 0.52
CACNA1FO60840 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.27■□□□□ 0.52
CACNA1FO60840 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1FO60840 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.27■□□□□ 0.52
CACNA1FO60840 EEF1DP6-201ENST00000449232 372 ntBASIC18.27■□□□□ 0.52
CACNA1FO60840 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.27■□□□□ 0.52
CACNA1FO60840 AC090857.1-201ENST00000527400 390 ntBASIC18.27■□□□□ 0.52
CACNA1FO60840 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1FO60840 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.27■□□□□ 0.52
CACNA1FO60840 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CACNA1FO60840 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.27■□□□□ 0.51
CACNA1FO60840 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1FO60840 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1FO60840 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1FO60840 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1FO60840 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1FO60840 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1FO60840 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1FO60840 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1FO60840 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 CAP2P1-201ENST00000557743 1390 ntBASIC18.26■□□□□ 0.51
CACNA1FO60840 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.26■□□□□ 0.51
CACNA1FO60840 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.26■□□□□ 0.51
CACNA1FO60840 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1FO60840 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.26■□□□□ 0.51
CACNA1FO60840 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.26■□□□□ 0.51
CACNA1FO60840 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1FO60840 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CACNA1FO60840 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1FO60840 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms