Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC093433.1-201ENST00000458048 571 ntBASIC14□□□□□ -0.17
HCN1O60741 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14□□□□□ -0.17
HCN1O60741 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HCN1O60741 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14□□□□□ -0.17
HCN1O60741 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14□□□□□ -0.17
HCN1O60741 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14□□□□□ -0.17
HCN1O60741 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14□□□□□ -0.17
HCN1O60741 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HCN1O60741 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 AC015656.1-201ENST00000624209 3578 ntBASIC13.99□□□□□ -0.17
HCN1O60741 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HCN1O60741 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HCN1O60741 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.99□□□□□ -0.17
HCN1O60741 BCRP2-202ENST00000447763 634 ntBASIC13.99□□□□□ -0.17
HCN1O60741 KLF2P4-201ENST00000451959 1225 ntBASIC13.99□□□□□ -0.17
HCN1O60741 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 AC022137.2-201ENST00000503482 481 ntBASIC13.99□□□□□ -0.17
HCN1O60741 BCRP6-201ENST00000510112 632 ntBASIC13.99□□□□□ -0.17
HCN1O60741 BCRP7-201ENST00000511549 544 ntBASIC13.99□□□□□ -0.17
HCN1O60741 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
HCN1O60741 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HCN1O60741 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HCN1O60741 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HCN1O60741 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 AC010327.5-201ENST00000586923 3061 ntBASIC13.98□□□□□ -0.17
HCN1O60741 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms