Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1AO00322 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UPK1AO00322 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1AO00322 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UPK1AO00322 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1AO00322 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1AO00322 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1AO00322 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 AC015818.8-201ENST00000587907 1519 ntBASIC14.1□□□□□ -0.15
UPK1AO00322 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 MSTO2P-201ENST00000314835 1709 ntBASIC14.1□□□□□ -0.15
UPK1AO00322 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UPK1AO00322 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
UPK1AO00322 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK1AO00322 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.1□□□□□ -0.15
UPK1AO00322 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK1AO00322 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK1AO00322 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
UPK1AO00322 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 KRT8P35-201ENST00000483942 1338 ntBASIC14.1□□□□□ -0.15
UPK1AO00322 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK1AO00322 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK1AO00322 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK1AO00322 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 AC012617.1-204ENST00000586340 2305 ntBASIC14.09□□□□□ -0.15
UPK1AO00322 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK1AO00322 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 C8orf49-201ENST00000525043 1968 ntBASIC14.09□□□□□ -0.15
UPK1AO00322 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 CICP16-201ENST00000502609 2813 ntBASIC14.09□□□□□ -0.15
UPK1AO00322 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1AO00322 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK1AO00322 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK1AO00322 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 AP006294.1-201ENST00000415407 339 ntBASIC14.09□□□□□ -0.15
UPK1AO00322 ACTG1P3-201ENST00000431775 1114 ntBASIC14.09□□□□□ -0.15
UPK1AO00322 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK1AO00322 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.09□□□□□ -0.15
UPK1AO00322 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UPK1AO00322 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.09□□□□□ -0.15
UPK1AO00322 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1AO00322 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UPK1AO00322 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK1AO00322 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms