Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.95□□□□□ -0.02
CFAP99D6REC4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CFAP99D6REC4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC126335.2-201ENST00000623362 4637 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 TPM3P8-201ENST00000330554 643 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AL355994.1-201ENST00000424379 260 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC245100.3-201ENST00000441281 285 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC026434.2-201ENST00000506094 1078 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 CICP23-201ENST00000605013 2741 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PTENP1-202ENST00000532280 3996 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.94□□□□□ -0.02
CFAP99D6REC4 AC005252.3-201ENST00000623855 2258 ntBASIC14.94□□□□□ -0.02
CFAP99D6REC4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CFAP99D6REC4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.93□□□□□ -0.02
CFAP99D6REC4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC092933.1-201ENST00000393644 945 ntBASIC14.93□□□□□ -0.02
CFAP99D6REC4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 BOLA2P3-201ENST00000404566 256 ntBASIC14.93□□□□□ -0.02
CFAP99D6REC4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC016694.1-201ENST00000434179 700 ntBASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 AC007688.1-201ENST00000475592 759 ntBASIC14.93□□□□□ -0.02
CFAP99D6REC4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CFAP99D6REC4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms