Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC018529.2-202ENST00000611482 3087 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC093525.8-201ENST00000624099 1342 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MSTO2P-201ENST00000314835 1709 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CSF2RBP1-201ENST00000447905 391 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FO681548.1-201ENST00000455617 1132 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC022137.2-201ENST00000503482 481 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC106760.1-201ENST00000508690 800 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL033527.4-201ENST00000641026 673 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC015656.1-201ENST00000624209 3578 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 REXO1L6P-201ENST00000603433 1515 ntBASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms