Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AL355334.1-201ENST00000417713 215 ntBASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AC131206.1-201ENST00000538078 1211 ntBASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MIR3188-201ENST00000583494 85 ntBASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AC242376.2-201ENST00000619355 883 ntBASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 HLA-C-210ENST00000640219 976 ntBASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC187A0A096LP49 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCDC187A0A096LP49 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms