Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AC036164.1-201ENST00000570544 333 ntBASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.98■□□□□ 0.47
DDX49Q9Y6V7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 CU634019.7-201ENST00000624153 1185 ntBASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 FP236241.2-201ENST00000624906 1185 ntBASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 REXO1L6P-201ENST00000603433 1515 ntBASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX49Q9Y6V7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 AC084364.1-201ENST00000551967 1556 ntBASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 MBLAC2-202ENST00000514906 1936 ntBASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 MIR5189-201ENST00000577370 114 ntBASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 MIR6799-201ENST00000620297 69 ntBASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.96■□□□□ 0.47
DDX49Q9Y6V7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms