Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SPDYE19P-201ENST00000338590 713 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 VDAC1P7-201ENST00000462417 847 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC093214.1-201ENST00000511688 1107 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC104596.2-201ENST00000512793 793 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AL662799.1-202ENST00000614205 422 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 AC106028.4-201ENST00000614509 607 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 BX539320.1-201ENST00000623759 877 ntBASIC14.03□□□□□ -0.16
IFT52Q9Y366 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFT52Q9Y366 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
IFT52Q9Y366 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFT52Q9Y366 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFT52Q9Y366 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFT52Q9Y366 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFT52Q9Y366 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.02□□□□□ -0.16
IFT52Q9Y366 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFT52Q9Y366 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 MRPS18AP1-201ENST00000414458 589 ntBASIC14.02□□□□□ -0.17
IFT52Q9Y366 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 HLA-K-203ENST00000430151 1046 ntBASIC14.02□□□□□ -0.17
IFT52Q9Y366 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 AC093004.1-201ENST00000508850 424 ntBASIC14.02□□□□□ -0.17
IFT52Q9Y366 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 BRI3BPP1-201ENST00000594224 787 ntBASIC14.02□□□□□ -0.17
IFT52Q9Y366 AL390955.2-201ENST00000603032 514 ntBASIC14.02□□□□□ -0.17
IFT52Q9Y366 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IFT52Q9Y366 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFT52Q9Y366 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms