Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC098614.1-201ENST00000368528 745 ntBASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AP006294.1-201ENST00000415407 339 ntBASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 CRB3P1-201ENST00000449338 276 ntBASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC093433.1-201ENST00000458048 571 ntBASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS9D1Q9Y2B5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 ACTG1P3-201ENST00000431775 1114 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AC011495.1-201ENST00000498085 584 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SRPK2P-201ENST00000523408 1100 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 WASH4P-201ENST00000564273 1246 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SALL4P5-201ENST00000419001 1760 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AL009178.2-201ENST00000597278 2719 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 AL355578.1-201ENST00000607405 1328 ntBASIC14.92□□□□□ -0.02
VPS9D1Q9Y2B5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS9D1Q9Y2B5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS9D1Q9Y2B5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms