Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AC104457.1-201ENST00000401024 814 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 FAM86GP-201ENST00000448322 971 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AC004461.2-201ENST00000629517 803 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 AC083964.2-201ENST00000623988 2396 ntBASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGB4Q9UN71 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 AC007787.1-201ENST00000588095 1583 ntBASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGB4Q9UN71 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AC004066.1-201ENST00000502488 802 ntBASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AC044860.1-202ENST00000559481 777 ntBASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AC015911.4-201ENST00000588022 1070 ntBASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AL359881.3-201ENST00000602640 1721 ntBASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGB4Q9UN71 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGB4Q9UN71 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms