Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
THUMPD1Q9NXG2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
THUMPD1Q9NXG2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.07□□□□□ -0.16
THUMPD1Q9NXG2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.07□□□□□ -0.16
THUMPD1Q9NXG2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
THUMPD1Q9NXG2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AL137784.3-201ENST00000623858 2288 ntBASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 SPDYE19P-201ENST00000338590 713 ntBASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 C1QBPP1-201ENST00000400117 770 ntBASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 GIMAP3P-201ENST00000495150 836 ntBASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AGGF1P1-201ENST00000509500 2073 ntBASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
THUMPD1Q9NXG2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 SOCS2P1-201ENST00000417727 557 ntBASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 RNA5SP421-201ENST00000516864 134 ntBASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
THUMPD1Q9NXG2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THUMPD1Q9NXG2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms