Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 AL365181.3-201ENST00000605886 3222 ntBASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMBRD1Q9NUN5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 MRPL37P1-201ENST00000592451 1337 ntBASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 TIMM17BP1-201ENST00000545713 516 ntBASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 AL844908.2-201ENST00000609461 460 ntBASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LMBRD1Q9NUN5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 AL139094.1-201ENST00000405549 1188 ntBASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 ZNF890P-202ENST00000530367 1156 ntBASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 AC069262.1-201ENST00000539058 672 ntBASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 AL662799.1-202ENST00000614205 422 ntBASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMBRD1Q9NUN5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms