Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 AL355864.2-201ENST00000447420 863 ntBASIC15.77■□□□□ 0.12
CD248Q9HCU0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 KRT90P-201ENST00000549264 1064 ntBASIC15.77■□□□□ 0.12
CD248Q9HCU0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.77■□□□□ 0.12
CD248Q9HCU0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD248Q9HCU0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
CD248Q9HCU0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CD248Q9HCU0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.77■□□□□ 0.11
CD248Q9HCU0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.77■□□□□ 0.11
CD248Q9HCU0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.77■□□□□ 0.11
CD248Q9HCU0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD248Q9HCU0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 AL133267.1-201ENST00000398220 340 ntBASIC15.76■□□□□ 0.11
CD248Q9HCU0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 AC092127.1-201ENST00000567093 3455 ntBASIC15.76■□□□□ 0.11
CD248Q9HCU0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms