Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 MIR193A-201ENST00000384882 88 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 WDR54-202ENST00000409791 854 ntTSL 3 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 RN7SL838P-201ENST00000481676 295 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 RBM7-208ENST00000545678 867 ntTSL 3 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ABCD1P3-201ENST00000562927 605 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AL359091.4-201ENST00000610052 409 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC004910.1-201ENST00000433493 787 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AL021707.6-201ENST00000609212 491 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 FLJ38576-201ENST00000623820 2459 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC095040.1-201ENST00000513286 675 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 SNORD3B-1-201ENST00000577988 758 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 RN7SL478P-201ENST00000584358 298 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AC239600.1-201ENST00000603201 462 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 AL121753.2-201ENST00000624581 1461 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 SALL4P5-201ENST00000419001 1760 ntBASIC13.43□□□□□ -0.26
CHD8Q9HCK8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHD8Q9HCK8 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 EEF1GP8-201ENST00000506566 1154 ntBASIC13.42□□□□□ -0.26
CHD8Q9HCK8 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 MIR5193-201ENST00000584510 109 ntBASIC13.42□□□□□ -0.26
CHD8Q9HCK8 PPY-202ENST00000587006 431 ntTSL 3 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHD8Q9HCK8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms