Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 AL008718.2-201ENST00000609206 1313 ntBASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 AC090502.4-201ENST00000551714 1386 ntBASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBE2OQ9C0C9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 RN7SKP175-201ENST00000408472 289 ntBASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 AC093752.3-201ENST00000567343 901 ntBASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 MIR4522-201ENST00000584932 87 ntBASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 AC073592.2-201ENST00000623062 780 ntBASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBE2OQ9C0C9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC010141.1-201ENST00000411585 623 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 HIST2H2BA-201ENST00000412169 381 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC078875.1-201ENST00000431907 724 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC092638.2-201ENST00000441105 947 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC084752.1-201ENST00000509766 622 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 MIR4472-1-201ENST00000584349 80 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 AC005618.3-201ENST00000624928 458 ntBASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms