Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 IGHV3-71-201ENST00000523324 359 ntBASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AP005019.2-201ENST00000615104 511 ntBASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF3BQ9BZI7 AL365209.1-201ENST00000624418 6473 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 GIMAP3P-201ENST00000495150 836 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 CU634019.7-201ENST00000624153 1185 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 FP236241.2-201ENST00000624906 1185 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 SALL4P5-201ENST00000419001 1760 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ST20-AS1-201ENST00000560255 4223 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 AC003102.2-201ENST00000589195 1469 ntBASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF3BQ9BZI7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ACTBP8-201ENST00000403258 1108 ntBASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UPF3BQ9BZI7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF3BQ9BZI7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms