Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 DUX4L27-201ENST00000554796 1261 ntBASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AL662799.1-202ENST00000614205 422 ntBASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AL390754.1-201ENST00000619088 582 ntBASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 AL359881.3-201ENST00000602640 1721 ntBASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HDHD3Q9BSH5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC090505.1-201ENST00000430515 1834 ntBASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC067863.1-201ENST00000494933 530 ntBASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC104794.3-201ENST00000566840 1248 ntBASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 CICP17-201ENST00000418553 2377 ntBASIC12.61□□□□□ -0.39
HDHD3Q9BSH5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms