Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 CYP46A4P-201ENST00000414953 267 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC022217.1-201ENST00000521069 738 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC013355.1-201ENST00000562625 723 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC004923.1-202ENST00000642106 209 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 AC003102.2-201ENST00000589195 1469 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.28■□□□□ 0.36
SLF1Q9BQI6 WASH3P-207ENST00000560956 1394 ntBASIC17.28■□□□□ 0.36
SLF1Q9BQI6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC023090.2-201ENST00000625182 2110 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC004899.1-201ENST00000424687 1714 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 TLE1P1-201ENST00000422965 589 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 SPTLC1P5-201ENST00000450718 252 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 MIR3619-201ENST00000579667 83 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 RN7SL163P-201ENST00000583100 276 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC106872.11-201ENST00000605838 421 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AL645939.5-201ENST00000606834 243 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 AC138627.1-207ENST00000641560 1006 ntBASIC17.27■□□□□ 0.36
SLF1Q9BQI6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLF1Q9BQI6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.27■□□□□ 0.35
SLF1Q9BQI6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TUBBP5-203ENST00000508529 1334 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms