Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
USB1Q9BQ65 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.52□□□□□ -0.25
USB1Q9BQ65 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.52□□□□□ -0.25
USB1Q9BQ65 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
USB1Q9BQ65 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
USB1Q9BQ65 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC027601.5-201ENST00000624065 2482 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC016694.1-201ENST00000434179 700 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC022210.1-201ENST00000449856 793 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AP001889.1-201ENST00000525414 633 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 HILS1-202ENST00000545329 423 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC025181.2-201ENST00000606994 802 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC005252.2-201ENST00000624630 1141 ntBASIC13.51□□□□□ -0.25
USB1Q9BQ65 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.51□□□□□ -0.25
USB1Q9BQ65 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
USB1Q9BQ65 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC097376.2-205ENST00000610159 5334 ntBASIC13.5□□□□□ -0.25
USB1Q9BQ65 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms