Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTPN18Q99952 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTPN18Q99952 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 KRT18P46-201ENST00000435568 1279 ntBASIC16.69■□□□□ 0.26
PTPN18Q99952 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.69■□□□□ 0.26
PTPN18Q99952 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 ABHD17AP9-201ENST00000561925 548 ntBASIC16.69■□□□□ 0.26
PTPN18Q99952 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 MME-218ENST00000625667 363 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.69■□□□□ 0.26
PTPN18Q99952 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC020658.6-201ENST00000623564 1870 ntBASIC16.69■□□□□ 0.26
PTPN18Q99952 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTPN18Q99952 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 CICP23-201ENST00000605013 2741 ntBASIC16.69■□□□□ 0.26
PTPN18Q99952 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN18Q99952 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 AC011270.2-201ENST00000624293 2550 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTPN18Q99952 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN18Q99952 SCARNA12-201ENST00000459155 270 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN18Q99952 GOLGA2P7-209ENST00000560408 745 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN18Q99952 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN18Q99952 AP005264.6-204ENST00000588436 719 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 AL627230.2-201ENST00000613254 655 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 MIR6746-201ENST00000620971 63 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN18Q99952 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN18Q99952 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 AL391005.1-201ENST00000623953 2435 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 AGGF1P1-201ENST00000509500 2073 ntBASIC16.68■□□□□ 0.26
PTPN18Q99952 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN18Q99952 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN18Q99952 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PTPN18Q99952 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN18Q99952 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
PTPN18Q99952 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN18Q99952 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC063952.3-201ENST00000467756 308 ntBASIC16.67■□□□□ 0.26
PTPN18Q99952 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN18Q99952 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN18Q99952 CYP4F36P-201ENST00000589193 186 ntBASIC16.67■□□□□ 0.26
PTPN18Q99952 AC006483.2-201ENST00000609813 515 ntBASIC16.67■□□□□ 0.26
PTPN18Q99952 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN18Q99952 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms