Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 MYCLP2-201ENST00000449268 967 ntBASIC14.65□□□□□ -0.06
NPAS2Q99743 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 AC123567.1-201ENST00000548294 1261 ntBASIC14.65□□□□□ -0.06
NPAS2Q99743 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.65□□□□□ -0.06
NPAS2Q99743 IGHV3-72-202ENST00000621503 303 ntBASIC14.65□□□□□ -0.06
NPAS2Q99743 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
NPAS2Q99743 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPAS2Q99743 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPAS2Q99743 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
NPAS2Q99743 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NPAS2Q99743 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.64□□□□□ -0.07
NPAS2Q99743 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NPAS2Q99743 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
NPAS2Q99743 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
NPAS2Q99743 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 MEP1AP4-201ENST00000423244 1087 ntBASIC14.64□□□□□ -0.07
NPAS2Q99743 TPT1P11-201ENST00000458482 498 ntBASIC14.64□□□□□ -0.07
NPAS2Q99743 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.64□□□□□ -0.07
NPAS2Q99743 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.64□□□□□ -0.07
NPAS2Q99743 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.64□□□□□ -0.07
NPAS2Q99743 RARRES2P5-201ENST00000564013 466 ntBASIC14.64□□□□□ -0.07
NPAS2Q99743 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.64□□□□□ -0.07
NPAS2Q99743 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.64□□□□□ -0.07
NPAS2Q99743 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NPAS2Q99743 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NPAS2Q99743 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.64□□□□□ -0.07
NPAS2Q99743 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPAS2Q99743 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPAS2Q99743 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.63□□□□□ -0.07
NPAS2Q99743 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPAS2Q99743 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPAS2Q99743 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms