Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AC073621.1-201ENST00000392730 636 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AC136604.1-201ENST00000418535 575 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 DUSP5P1-201ENST00000441325 1139 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 EMBP1-201ENST00000458200 901 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AL356488.2-201ENST00000602755 427 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AL078644.1-201ENST00000609881 752 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AL607033.1-201ENST00000623900 1599 ntBASIC14.08□□□□□ -0.16
NR1H4Q96RI1 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H4Q96RI1 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AP002414.3-201ENST00000589352 1468 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 KRT18P27-201ENST00000427733 1299 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC105339.3-201ENST00000560043 636 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC008667.4-201ENST00000607370 168 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC008735.5-201ENST00000623544 497 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC005593.1-201ENST00000624894 515 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AL645728.2-202ENST00000641679 227 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 BX324167.2-201ENST00000623717 3316 ntBASIC14.07□□□□□ -0.16
NR1H4Q96RI1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
NR1H4Q96RI1 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 AP3S2-216ENST00000617003 1561 ntBASIC14.06□□□□□ -0.16
NR1H4Q96RI1 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H4Q96RI1 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms