Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AL928921.2-201ENST00000641325 2442 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 FAAHP1-202ENST00000446499 1238 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 RN7SL589P-201ENST00000481268 310 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 PDPK2P-202ENST00000562415 1191 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AL138918.1-201ENST00000568306 659 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AC018845.2-201ENST00000568326 409 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 AC064836.3-201ENST00000607928 673 ntBASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AP1S3Q96PC3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms