Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 CU639417.3-201ENST00000624240 1404 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 AC087386.2-201ENST00000623212 4637 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AC093525.8-201ENST00000624099 1342 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AP001063.1-201ENST00000568332 529 ntBASIC14.13□□□□□ -0.15
COL21A1Q96P44 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL21A1Q96P44 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL21A1Q96P44 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms