Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC44A1Q8WWI5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 INTS4P2-202ENST00000614726 2019 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 MRPL37P1-201ENST00000592451 1337 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC004890.2-204ENST00000481968 304 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 GIMAP3P-201ENST00000495150 836 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RFPL4AP1-201ENST00000530883 850 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 TPRX2P-201ENST00000535362 881 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC106028.4-201ENST00000614509 607 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 AC022144.1-201ENST00000602255 1580 ntBASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC44A1Q8WWI5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RRP7BP-205ENST00000566851 833 ntBASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AL390955.2-201ENST00000603032 514 ntBASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms