Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 AL139010.1-201ENST00000454878 894 ntBASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SAPCD2P3-201ENST00000455031 850 ntBASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 AC102953.2-201ENST00000609755 3026 ntBASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AL354702.1-201ENST00000442006 1960 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AC105233.2-201ENST00000523697 349 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AF228730.5-201ENST00000530288 346 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 MIR4751-201ENST00000578027 74 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 LINC01711-201ENST00000598340 967 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 AC007064.4-201ENST00000637740 555 ntBASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.53□□□□□ -0.24
CROCCP3Q8IVE0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CROCCP3Q8IVE0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CROCCP3Q8IVE0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms