Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 AL157996.1-201ENST00000624684 2299 ntBASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 AC142381.1-201ENST00000426099 345 ntBASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 AC012313.10-201ENST00000623509 926 ntBASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
LYSMD2Q8IV50 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.08□□□□□ -0.31
LYSMD2Q8IV50 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AP3S2-216ENST00000617003 1561 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AC002056.1-201ENST00000395613 760 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AZGP1P1-201ENST00000411909 902 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 IGHV3-22-201ENST00000520721 359 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AC027307.2-201ENST00000591252 911 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AC099522.2-201ENST00000607001 744 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 MIR7706-201ENST00000613747 67 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AC008267.7-201ENST00000624570 1194 ntBASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 CLK3P2-201ENST00000427566 1453 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms