Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 AC104073.2-201ENST00000453737 312 ntBASIC15.82■□□□□ 0.12
RNF135Q8IUD6 RTN3P1-201ENST00000536295 711 ntBASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF135Q8IUD6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 LINC02228-204ENST00000642115 2962 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 MIR1227-201ENST00000408484 88 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC116345.2-201ENST00000512837 523 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC092171.5-201ENST00000608012 942 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 AC097376.2-205ENST00000610159 5334 ntBASIC15.81■□□□□ 0.12
RNF135Q8IUD6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF135Q8IUD6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms