Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AL445209.1-201ENST00000607269 3491 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 RHOQP3-201ENST00000437982 621 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 HCG4B-203ENST00000450128 991 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 UNC93B6-202ENST00000528242 690 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 AL121912.1-201ENST00000603683 238 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 FAM215A-202ENST00000632077 792 ntBASIC12.43□□□□□ -0.42
ZNF546Q86UE3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF546Q86UE3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AL139010.1-201ENST00000454878 894 ntBASIC12.42□□□□□ -0.42
ZNF546Q86UE3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AL645728.2-202ENST00000641679 227 ntBASIC12.42□□□□□ -0.42
ZNF546Q86UE3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AC073869.1-201ENST00000415574 2762 ntBASIC12.42□□□□□ -0.42
ZNF546Q86UE3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF546Q86UE3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms