Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTR9Q6PD62 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTR9Q6PD62 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AP001258.2-201ENST00000529891 490 ntBASIC17.65■□□□□ 0.42
CTR9Q6PD62 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 AC018442.1-201ENST00000421439 2061 ntBASIC17.65■□□□□ 0.42
CTR9Q6PD62 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTR9Q6PD62 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTR9Q6PD62 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTR9Q6PD62 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CTR9Q6PD62 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 AL122018.1-201ENST00000446607 2310 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 KRT8P13-201ENST00000463294 1010 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 AC126915.1-201ENST00000522847 1038 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 AC008825.2-201ENST00000603374 718 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 AC022748.3-201ENST00000621828 275 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CICP14-201ENST00000629111 2732 ntBASIC17.64■□□□□ 0.41
CTR9Q6PD62 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.64■□□□□ 0.41
CTR9Q6PD62 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTR9Q6PD62 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms