Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 AC099336.1-201ENST00000417053 1171 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 POM121L8P-201ENST00000417732 1281 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 FAM21FP-201ENST00000426241 1131 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 HLA-V-201ENST00000429037 534 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 POM121L9P-203ENST00000441984 1285 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 CSF2RBP1-201ENST00000447905 391 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 AL590640.2-201ENST00000457038 527 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 AL354989.2-201ENST00000435838 1540 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 RPS2P32-201ENST00000439199 892 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 AC026434.2-201ENST00000506094 1078 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 RNA5SP412-201ENST00000516234 123 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 MIR4259-201ENST00000584466 101 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.54■□□□□ 0.08
TTC39BQ5VTQ0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms