Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 AC016700.1-201ENST00000429424 312 ntBASIC20.38■□□□□ 0.85
CDCA8Q53HL2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 SNORD3B-2-202ENST00000571722 791 ntBASIC20.38■□□□□ 0.85
CDCA8Q53HL2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 AL132994.2-201ENST00000603120 687 ntBASIC20.38■□□□□ 0.85
CDCA8Q53HL2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA8Q53HL2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 MBLAC2-202ENST00000514906 1936 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 FAM90A7P-201ENST00000382628 1395 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 FAM90A23P-201ENST00000400136 1395 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC006122.1-201ENST00000493323 440 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC133540.1-201ENST00000620845 1019 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC100757.4-201ENST00000626934 759 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC144522.1-201ENST00000625111 1658 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 TMBIM7P-202ENST00000641474 1516 ntBASIC20.37■□□□□ 0.85
CDCA8Q53HL2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA8Q53HL2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 AGGF1P1-201ENST00000509500 2073 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 AC022217.1-201ENST00000521069 738 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms