Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 HNRNPDP2-201ENST00000406475 478 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 PTCD2P2-201ENST00000415579 1095 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 FRG2FP-202ENST00000419104 559 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL671277.1-201ENST00000429656 993 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 MTND4P15-201ENST00000437913 1033 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 LINC00333-201ENST00000446314 613 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 KRT18P2-201ENST00000447938 1258 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 KRT18P56-201ENST00000507275 550 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 MTND3P12-201ENST00000559068 328 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC145285.3-201ENST00000564603 959 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 DMBT1P1-203ENST00000636837 4628 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 AC136759.1-202ENST00000530858 2194 ntBASIC11.47□□□□□ -0.57
LINC01559Q495D7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01559Q495D7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01559Q495D7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01559Q495D7 AC012508.2-201ENST00000567613 1472 ntBASIC11.46□□□□□ -0.57
LINC01559Q495D7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01559Q495D7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms