RNA–Protein interactions for RNA: ENST00000491849.1

LINC00971-203, long intergenic non-protein coding RNA 971, humanhuman

TSL 3 BASIC

Gene LINC00971, Length 452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00971-203ENST00000491849 AEBP2Q6ZN18 517 aaPredicted RBP33.02■■■□□ 2.88
LINC00971-203ENST00000491849 CHIC1Q5VXU3 224 aa31.22■■■□□ 2.59
LINC00971-203ENST00000491849 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
LINC00971-203ENST00000491849 PHF23Q9BUL5 403 aaPredicted RBP27.85■■■□□ 2.05
LINC00971-203ENST00000491849 FOXD1Q16676 465 aa26.34■■□□□ 1.81
LINC00971-203ENST00000491849 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
LINC00971-203ENST00000491849 MSH5O43196 834 aa24.82■■□□□ 1.56
LINC00971-203ENST00000491849 PIAS4Q8N2W9 510 aaPredicted RBP24.58■■□□□ 1.53
LINC00971-203ENST00000491849 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
LINC00971-203ENST00000491849 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
LINC00971-203ENST00000491849 ADRA2BP18089 450 aa24.34■■□□□ 1.49
LINC00971-203ENST00000491849 MAPK8IP2Q13387 824 aaPredicted RBP22.4■■□□□ 1.18
LINC00971-203ENST00000491849 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
LINC00971-203ENST00000491849 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
LINC00971-203ENST00000491849 PPP4R3CPQ6ZMV5 832 aa21.74■■□□□ 1.07
LINC00971-203ENST00000491849 HOXD11P31277 338 aaPredicted RBP21.49■■□□□ 1.03
LINC00971-203ENST00000491849 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
LINC00971-203ENST00000491849 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
LINC00971-203ENST00000491849 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
LINC00971-203ENST00000491849 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
LINC00971-203ENST00000491849 RNF39Q9H2S5 420 aa21.11■□□□□ 0.97
LINC00971-203ENST00000491849 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
LINC00971-203ENST00000491849 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
LINC00971-203ENST00000491849 C1QBPQ07021 282 aaKnown RBP20.84■□□□□ 0.93
LINC00971-203ENST00000491849 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
LINC00971-203ENST00000491849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC00971-203ENST00000491849 KCNA4P22459 653 aa20.11■□□□□ 0.81
LINC00971-203ENST00000491849 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
LINC00971-203ENST00000491849 CAPN15O75808 1086 aa19.74■□□□□ 0.75
LINC00971-203ENST00000491849 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
LINC00971-203ENST00000491849 DSG3P32926 999 aa19.69■□□□□ 0.74
LINC00971-203ENST00000491849 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
LINC00971-203ENST00000491849 APLP2Q06481 763 aa19.52■□□□□ 0.72
LINC00971-203ENST00000491849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
LINC00971-203ENST00000491849 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
LINC00971-203ENST00000491849 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
LINC00971-203ENST00000491849 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
LINC00971-203ENST00000491849 SAMD1Q6SPF0 538 aaPredicted RBP19.3■□□□□ 0.68
LINC00971-203ENST00000491849 ABCB7O75027 752 aa19.23■□□□□ 0.67
LINC00971-203ENST00000491849 POTEHQ6S545 545 aa19.19■□□□□ 0.66
LINC00971-203ENST00000491849 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
LINC00971-203ENST00000491849 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
LINC00971-203ENST00000491849 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
LINC00971-203ENST00000491849 POLA2Q14181 598 aa18.8■□□□□ 0.6
LINC00971-203ENST00000491849 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
LINC00971-203ENST00000491849 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
LINC00971-203ENST00000491849 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
LINC00971-203ENST00000491849 ZBTB22O15209 634 aa18.49■□□□□ 0.55
LINC00971-203ENST00000491849 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
LINC00971-203ENST00000491849 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
LINC00971-203ENST00000491849 ATXN8OSP0DMR3 200 aa18.22■□□□□ 0.51
LINC00971-203ENST00000491849 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
LINC00971-203ENST00000491849 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
LINC00971-203ENST00000491849 PIP4P2Q8N4L2 257 aa17.98■□□□□ 0.47
LINC00971-203ENST00000491849 PITPNM1O00562 1244 aa17.94■□□□□ 0.46
LINC00971-203ENST00000491849 FBLN2P98095 1184 aa17.92■□□□□ 0.46
LINC00971-203ENST00000491849 SP7Q8TDD2 431 aaPredicted RBP17.89■□□□□ 0.45
LINC00971-203ENST00000491849 SPDYE2BA6NHP3 402 aa17.88■□□□□ 0.45
LINC00971-203ENST00000491849 SPDYE6P0CI01 402 aa17.88■□□□□ 0.45
LINC00971-203ENST00000491849 SPDYE2Q495Y8 402 aa17.88■□□□□ 0.45
LINC00971-203ENST00000491849 FXR2P51116 673 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC00971-203ENST00000491849 HAX1O00165 279 aa17.71■□□□□ 0.43
LINC00971-203ENST00000491849 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
LINC00971-203ENST00000491849 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
LINC00971-203ENST00000491849 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
LINC00971-203ENST00000491849 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
LINC00971-203ENST00000491849 SSUH2Q9Y2M2 353 aa17.59■□□□□ 0.41
LINC00971-203ENST00000491849 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
LINC00971-203ENST00000491849 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
LINC00971-203ENST00000491849 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
LINC00971-203ENST00000491849 EVX2Q03828 476 aa17.41■□□□□ 0.38
LINC00971-203ENST00000491849 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00971-203ENST00000491849 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
LINC00971-203ENST00000491849 PRR29P0C7W0 189 aa17.25■□□□□ 0.35
LINC00971-203ENST00000491849 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
LINC00971-203ENST00000491849 GABBR2O75899 941 aa17.07■□□□□ 0.32
LINC00971-203ENST00000491849 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
LINC00971-203ENST00000491849 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
LINC00971-203ENST00000491849 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
LINC00971-203ENST00000491849 CLCN6P51797 869 aa16.85■□□□□ 0.29
LINC00971-203ENST00000491849 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
LINC00971-203ENST00000491849 LHX8Q68G74 356 aa16.77■□□□□ 0.28
LINC00971-203ENST00000491849 CREBZFQ9NS37 354 aa16.75■□□□□ 0.27
LINC00971-203ENST00000491849 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
LINC00971-203ENST00000491849 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
LINC00971-203ENST00000491849 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
LINC00971-203ENST00000491849 DCBLD2Q96PD2 775 aa16.59■□□□□ 0.25
LINC00971-203ENST00000491849 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.24
LINC00971-203ENST00000491849 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00971-203ENST00000491849 PROM2Q8N271 834 aa16.47■□□□□ 0.23
LINC00971-203ENST00000491849 MNX1P50219 401 aaPredicted RBP16.44■□□□□ 0.22
LINC00971-203ENST00000491849 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
LINC00971-203ENST00000491849 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
LINC00971-203ENST00000491849 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
LINC00971-203ENST00000491849 ASTLQ6HA08 431 aaPredicted RBP16.13■□□□□ 0.17
LINC00971-203ENST00000491849 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
LINC00971-203ENST00000491849 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
LINC00971-203ENST00000491849 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
LINC00971-203ENST00000491849 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
LINC00971-203ENST00000491849 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms