Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 LRRC59-203ENST00000576448 1531 ntBASIC9.92□□□□□ -0.82
SYCNQ0VAF6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCNQ0VAF6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC140479.7-201ENST00000636301 2332 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SON-203ENST00000381679 7860 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AL731571.1-201ENST00000617058 5428 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 FAM207CP-201ENST00000443486 507 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SPTLC1P1-201ENST00000447199 261 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MYCLP2-201ENST00000449268 967 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SERBP1P5-201ENST00000510079 1181 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AC027796.2-201ENST00000575326 344 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AL603764.1-201ENST00000636452 321 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PRSS30P-206ENST00000641773 873 ntBASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCNQ0VAF6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms