Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SSBP1Q04837 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP1Q04837 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 MTND6P24-201ENST00000440466 518 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP1Q04837 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.61□□□□□ -0.39
SSBP1Q04837 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 AC104692.2-201ENST00000603054 253 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 LINC01115-203ENST00000606068 577 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.61□□□□□ -0.39
SSBP1Q04837 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
SSBP1Q04837 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 AL158070.2-201ENST00000623713 1621 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 NCLP1-201ENST00000445357 1963 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 TUBB3P1-201ENST00000405796 1332 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SSBP1Q04837 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP1Q04837 NUS1P3-201ENST00000423502 862 ntBASIC12.6□□□□□ -0.39
SSBP1Q04837 AC004832.2-201ENST00000426397 482 ntBASIC12.6□□□□□ -0.39
SSBP1Q04837 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 AL353779.1-201ENST00000434793 351 ntBASIC12.6□□□□□ -0.39
SSBP1Q04837 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP1Q04837 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP1Q04837 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP1Q04837 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 AC004461.2-201ENST00000629517 803 ntBASIC12.6□□□□□ -0.39
SSBP1Q04837 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SSBP1Q04837 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms