Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IRX3P78415 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IRX3P78415 SHC1P1-201ENST00000425230 1745 ntBASIC17.39■□□□□ 0.37
IRX3P78415 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
IRX3P78415 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 EEF1DP6-201ENST00000449232 372 ntBASIC17.39■□□□□ 0.37
IRX3P78415 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX3P78415 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.39■□□□□ 0.37
IRX3P78415 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX3P78415 AC005324.6-201ENST00000587972 613 ntBASIC17.39■□□□□ 0.37
IRX3P78415 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.39■□□□□ 0.37
IRX3P78415 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 AC009955.4-201ENST00000597192 544 ntBASIC17.39■□□□□ 0.37
IRX3P78415 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.39■□□□□ 0.37
IRX3P78415 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 AL157791.1-201ENST00000553667 1699 ntBASIC17.39■□□□□ 0.37
IRX3P78415 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 AL137783.1-201ENST00000623494 1896 ntBASIC17.38■□□□□ 0.37
IRX3P78415 CICP11-201ENST00000434745 2827 ntBASIC17.38■□□□□ 0.37
IRX3P78415 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.38■□□□□ 0.37
IRX3P78415 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 MIR33B-201ENST00000385104 96 ntBASIC17.38■□□□□ 0.37
IRX3P78415 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX3P78415 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX3P78415 AC125604.1-201ENST00000496255 707 ntBASIC17.38■□□□□ 0.37
IRX3P78415 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.38■□□□□ 0.37
IRX3P78415 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
IRX3P78415 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX3P78415 SPCS2P2-201ENST00000603270 608 ntBASIC17.38■□□□□ 0.37
IRX3P78415 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.38■□□□□ 0.37
IRX3P78415 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IRX3P78415 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX3P78415 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
IRX3P78415 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX3P78415 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
IRX3P78415 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.37■□□□□ 0.37
IRX3P78415 AL596276.2-201ENST00000447525 331 ntBASIC17.37■□□□□ 0.37
IRX3P78415 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.37■□□□□ 0.37
IRX3P78415 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
IRX3P78415 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.37■□□□□ 0.37
IRX3P78415 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms