Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 INTS4P1-203ENST00000641008 3683 ntBASIC13.02□□□□□ -0.33
HIST1H3AP68431 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RN7SL692P-201ENST00000464677 288 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 AL391280.1-201ENST00000506969 1062 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 SLC25A47P1-201ENST00000531577 414 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 AC103988.2-201ENST00000561804 725 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 FKBP4P6-201ENST00000457486 1332 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 GRK6P1-201ENST00000400595 1711 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 INE2-201ENST00000630399 1874 ntBASIC13.01□□□□□ -0.33
HIST1H3AP68431 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H3AP68431 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H3AP68431 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H3AP68431 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13□□□□□ -0.33
HIST1H3AP68431 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H3AP68431 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13□□□□□ -0.33
HIST1H3AP68431 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H3AP68431 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 RN7SKP175-201ENST00000408472 289 ntBASIC13□□□□□ -0.33
HIST1H3AP68431 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H3AP68431 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms